This post may contain affiliate links. For more information, read my disclosure policy.

These pumpkin cream cheese muffins are just like the one’s you can get at Starbucks but BETTER because they’re homemade and less expensive to make!

Each soft and tender pumpkin muffin has a dollop of cream cheese filling baked inside – they are so good! Make these copycat muffins and you’ll want to skip the expensive coffee shop ones.

muffins with seeds and cream cheese in the center


Starbucks Pumpkin Muffins Copycat

Every fall I am SO excited when Starbucks has their pumpkin cream cheese muffins but lately I’ve been making my own and I am loving having my freezer stocked so I can have them all year. These homemade pumpkin cheesecake muffins are so much better than Starbucks; Pumpkin muffins are soft and moist with the perfect amount of pumpkin spice. There’s a little scoop of cream cheese filling so you get that cheesecake flavor and creaminess in every bite.

ingredients in pumpkin cream cheese muffins on counter.

Ingredients Needed

For this recipe I adapted my mom’s banana bread recipe, which I’ve used as a base for so many quick breads and muffins. It’s a really easy recipe and turning it into pumpkin muffins was a breeze.

  • Instead of butter, I like to use vegetable oil in this recipe. Butter is a little heavy and so using oil makes muffins that are airier and fluffier.
  • For the pumpkin be sure to buy canned pumpkin puree not pumpkin pie filling. They are two different things! Pumpkin pie filling has other ingredients while puree is just… well, pureed pumpkin. 
  • The muffins are flavored with pumpkin spice which is usually a combination of ground cinnamon, cloves, nutmeg, ginger and sometimes allspice. I make a lot of pumpkin baked goods during the fall season and it’s just easier to use a spice mix – less measuring!
  • Cream Cheese – make sure it’s room temperature to avoid lumps in your cheesecake mixture.

How to make Pumpkin Cream Cheese Muffins

  1. Add pumpkin puree, granulated sugar, and vegetable oil to a large bowl. Stir until combined then add pumpkin spice and eggs.
  2. Stir in salt, baking soda, milk, and flour and mix until combined. Place batter into muffin pan with cupcake liners.
  3. The filling is so good – like a little bite of cheesecake in each muffin! Just combine softened cream cheese, sugar and vanilla together in a bowl. 
  4. Drop one tablespoon of the mixture onto each muffin before they go in the oven. As the muffins bake, they will puff up around the cream cheese filling. When you take them out the filling will be peeking out and will be soft and creamy when you bite into it.
muffins with seeds and cream cheese in the center and bite missing

Variations & Substitutions

  • You can skip the pumpkin seeds if you want.
  • Any milk or nondairy milk will work in this recipe.
  • You can make gluten free muffins by substituting GF 1:1 AP flour.
muffins with seeds and cream cheese in the center

Expert Tips

  • Let the muffins cool for at least five minutes before serving them – they are so delicious warm from the oven!
  • For really tender muffins it’s best to mix it by hand just until the dry ingredients are absorbed into the wet ingredients. With a mixer you risk overmixing the batter. 
  • Make sure your cream cheese is softened to avoid lumps!

Storage

Store muffins in the refrigerator in an airtight container. You can also freeze them for a few months.

FAQ

My cheesecake sunk or slipped off and don’t look like yours!

In order to achieve the look that I have, make sure to make a little divot in the muffin batter, then place the cheesecake in that little indentation. Flatten the cheesecake slightly, pressing it into the batter.

muffins with seeds and cream cheese in the center

Pumpkin Cream Cheese Muffins Recipe

4.89 from 18 votes
Copycat Pumpkin Cream Cheese Muffins are my favorite pumpkin muffin recipe with a cheesecake filling! These easy muffins are a Starbucks Copycat and are the perfect easy breakfast or brunch muffin recipe for fall!
Prep Time 30 minutes
Cook Time 20 minutes
Total Time 50 minutes
Yield 18 muffins
Serving Size 1 muffin

Ingredients
 

For the Muffin

  • 1 cup (200g) granulated sugar
  • cup (79ml) vegetable oil
  • 1 cup (244g) pumpkin puree not pumpkin pie mix
  • 2 large eggs
  • ¼ cup (59ml) milk
  • 2 teaspoons pumpkin pie spice
  • ¼ teaspoon salt
  • 1 teaspoon baking soda
  • 2 cups (248g) all-purpose flour

For the Cream Cheese Filling

  • 8 ounces (226g) cream cheese softened
  • ½ cup (100g) granulated sugar
  • 1 teaspoon vanilla
  • Pumpkin Seeds optional
Save this recipe!
Get this sent to your inbox, plus get new recipes from us every week!

Instructions

  • Preheat oven to 350°. Line muffin tins with liners.
  • Stir pumpkin, oil, and sugar together in a large bowl. Do this by hand – don’t use a mixer. Stir in eggs, pumpkin pie spice, salt, and baking soda. Stir in 1 cup flour, then stir in milk, then stir in remaining 1 cup flour.
  • Divide evenly among muffin pans, filling each liner 1/2 full. Make a small indentation in the top of the muffin with the back of a spoon, a little holder for the cream cheese filling.
  • Stir together cream cheese, sugar, and vanilla.
  • Drop 1 tablespoon onto the top of each muffin. Use the back of a spoon to spread the cheesecake mixture into the little indentation you made and adhere it to the muffin batter. Sprinkle with 4-5 pumpkin seeds, optional.
  • Bake for about 15-20 minutes, until a toothpick inserted in the muffin part comes out with just a few crumbs stuck too it.
  • Cool at least 5 minutes before serving. Store in refrigerator. Muffins can be frozen for quick breakfasts!

Recipe Video

Recipe Notes

  • You can keep them in the refrigerator, too, but they will keep for a long time in the freezer. It’s such a treat to pull one out and warm it in the microwave for a sweet afternoon snack. 
  • It might be tempting to use a hand mixer for this recipe but I don’t recommend it. For really tender muffins it’s best to mix it by hand just until the dry ingredients are absorbed into the wet ingredients. With a mixer you risk overmixing the batter. 
  • Make sure your cream cheese is softened to avoid lumps!

Recipe Nutrition

Serving: 1muffin | Calories: 208kcal | Carbohydrates: 29g | Protein: 3g | Fat: 9g | Saturated Fat: 6g | Cholesterol: 32mg | Sodium: 143mg | Potassium: 72mg | Fiber: 1g | Sugar: 18g | Vitamin A: 2319IU | Vitamin C: 1mg | Calcium: 26mg | Iron: 1mg
Nutritional information not guaranteed to be accurate
Course Breakfast
Cuisine American

Copycat Pumpkin Cream Cheese Muffins are my favorite pumpkin muffin recipe with a cheesecake filling! These easy muffins are a Starbucks Copycat and are the perfect easy breakfast or brunch muffin recipe for fall!

Favorite Pumpkin Recipes



Dorothy Kern

Welcome to Crazy for Crust, where I share recipes that are sometimes crazy, often with a crust, and always served with a slice of life.

4.89 from 18 votes (10 ratings without comment)

Leave a Comment

Your email address will not be published. Required fields are marked *

Recipe Rating




24 Comments

  1. This recipe was so easy to follow. The ingredients were simple. (I had them already in my pantry.) I made these for breakfast for my family. They loved it! They thought I bought these at Starbucks. I told them, Nope! I made these from home. Way better than Starbucks, and so much cheaper!!
    I’m saving this recipe. Thank you so much.

    1. Make sure they’re completely cooled, then place in a single layer in an airtight container (I like using gallon size ziplock bags). You can also place a paper towel on top of them to absorb condensation.

  2. Super delicious. These are some of the best cream cheese pumpkin muffins I’ve ever had! They were a huge hit with my family and friends (made some as gifts for others). I had no problems with the cream cheese spreading thanks to the indenting and filling the muffins only half way up.
    Highly recommended!